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Welcome!

I am an Assistant Professor affiliated with BioInformatics Research Centre (BIRC) at the School of Computer Engineering, NTU. I am also an Adjunct Senior Research Scientist, at Genome Institute of Singapore (GIS). Previously I worked as a Research Scientist at National Center for Biotechnology Information (NCBI), National Institutes of Health (NIH), USA.

My research goal is to develop novel computational methods (algorithms, models, software, databases, etc.) to help answer biomedical questions (such as the mechanisms of cancer) critical for public health. Currently, I am focused on computational modeling of cell fate, with applications to research in stem cell and cancer.

Open positions: An open position of Research Fellow is available to work on computational systems biology on cancer cell modelling. It will start from March, 2014.

Research Interests

Computational systems biology of cell fate, single-cell analysis, stem cell
Genomics and Epigenomics, Gene regulatory network
Genome Instability, Recombination hotspots
Next-generation sequencing in transcriptome inference
Algorithm design, Scientific data mining and knowledge discovery

Education

B.Eng (Honors) Computer Science, 1996 - 2000, Zhejiang University, China
Ph.D. Computer Science, 2001 - 2006, University of California, Riverside, USA

Main Collaborators

Tao Jiang (PhD advisor), Dept. Computer Science, UC-Riverside
Stefano Lonardi (PhD advisor), Dept. Computer Science, UC-Riverside
Teresa M. Przytycka (Postdoc advisor), NCBI, NLM, NIH
Xin Chen, School of Physical and Mathematical Sciences, NTU
Timothy J. Close, Dept. Botany & Plant Sciences, UC-Riverside
Eugene Koonin, NCBI, NLM, NIH
Rafael Daniel Camerini-Otero, NIDDK, NIH
Jacek Capala, National Cancer Institute, NIH


Last updated: 02 Dec. 2013

Jie Zheng, Ph.D.

Assistant Professor
Division of Software and Information Systems
School of Computer Engineering
Nanyang Technological University

Blk N4-02c-113
50 Nanyang Avenue
Singapore, 639798

Tel: (65)6790-4287
Email: ZhengJie (at) ntu.edu.sg

 

 

 

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